Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAACCACCGCATATGCAT
.((((..((((((.((((((.&))))).).))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242874
GeneSymbolPRKCZ
Binding site1701,1722
Score0.923
Seed0
Au0.412
Energy-20.7
Binding len21
Me-8.095
Phylopstem3.667972857142857
Phylopflank3.301630955
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure