Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGTACAGCAGCAGTTGTAT
.(((((((((.((((((.(((&)))...)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242891
GeneSymbolCSDE1
Binding site289,312
Score0.846
Seed1
Au0.574
Energy-23.0
Binding len23
Me-6.618
Phylopstem1.8330554444444447
Phylopflank2.0205243
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure