Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCACTCAGTTGCAT
.((((((((.(((..((((((&))))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242891
GeneSymbolCSDE1
Binding site3397,3417
Score0.846
Seed1
Au0.603
Energy-21.7
Binding len20
Me-6.628
Phylopstem6.018388000000001
Phylopflank5.616860225
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure