Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGATCCGCTCCTGCCTGCGCCCGCAGCTGA
...(((((((((.(((.((((&.))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363066
GeneSymbolCLDN5
Binding site960,993
Score0.923
Seed0
Au0.265
Energy-25.6
Binding len19
Me-7.804
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure