Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCCTGGCG
.....((((.(((((((((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242892
GeneSymbolCSDE1
Binding site723,739
Score0.846
Seed0
Au0.574
Energy-20.8
Binding len16
Me-14.908
Phylopstem1.664054027272727
Phylopflank2.37391332625
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure