Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCACTCAGTTGCAT
.((((((((.(((..((((((&))))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242893
GeneSymbolCSDE1
Binding site2770,2790
Score0.923
Seed1
Au0.603
Energy-21.7
Binding len20
Me-6.628
Phylopstem3.2836051250000002
Phylopflank5.8357083375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure