Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCCTGGCG
.....((((.(((((((((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242893
GeneSymbolCSDE1
Binding site630,646
Score0.923
Seed0
Au0.574
Energy-20.8
Binding len16
Me-14.908
Phylopstem2.601981909090909
Phylopflank2.038825025
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure