Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACTGGCAAGTGCAGCGCCTGTAAT
(((((((((((.((((.((((&)).)).)))).))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242893
GeneSymbolCSDE1
Binding site2143,2169
Score0.821
Seed1
Au0.441
Energy-19.1
Binding len26
Me-7.284
Phylopstem4.549529000000001
Phylopflank4.402420299999999
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure