Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGACAGCAGGTTGCAAC
((((((((...(((((.((((&))))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242893
GeneSymbolCSDE1
Binding site1460,1481
Score0.846
Seed1
Au0.559
Energy-18.8
Binding len21
Me-9.061
Phylopstem5.82410075
Phylopflank5.34526387125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure