Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGGTGTGTGCCAC
...(((((((((.(((((....&)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242894
GeneSymbolZKSCAN3
Binding site2685,2702
Score0.846
Seed0
Au0.529
Energy-17.6
Binding len17
Me-7.804
Phylopstem-0.5416964111111111
Phylopflank-0.2751708775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure