Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGGAGCTGCC
..((((((.(((((.......&))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242903
GeneSymbolAKAP1
Binding site169,182
Score1.0
Seed1
Au0.426
Energy-20.2
Binding len13
Me-6.982
Phylopstem-0.386284165
Phylopflank0.5206902042499998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure