Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242906
GeneSymbolASCC2
Binding site1222,1265
Score1.0
Seed1
Au0.338
Energy-27.3
Binding len18
Me-3.938
Phylopstem3.7891587499999995
Phylopflank3.3838235887500003
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure