Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGATGTCAGGG
.((((((((.((..((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001242920
GeneSymbolPLTP
Binding site1232,1247
Score0.846
Seed1
Au0.382
Energy-16.3
Binding len15
Me-7.182
Phylopstem2.500353625
Phylopflank3.3223779999999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure