Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCCAACCGGGCAGTGGAGCCCCAGCTGCAGG
(((((((((((((((..((((&))))...)))))).............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242920
GeneSymbolPLTP
Binding site542,578
Score0.846
Seed1
Au0.338
Energy-23.9
Binding len36
Me-4.171
Phylopstem3.616530971428572
Phylopflank3.413139063750001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure