Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGCT
..(((((((((((((..((((&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242924
GeneSymbolZNF410
Binding site1742,1766
Score0.923
Seed1
Au0.544
Energy-21.9
Binding len24
Me-5.19
Phylopstem-0.04684988421052632
Phylopflank1.0732557060000005
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure