Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCCGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGC
(((((((((((((((.(((((&.))))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242925
GeneSymbolTMCC2
Binding site409,451
Score0.923
Seed1
Au0.265
Energy-30.8
Binding len23
Me-4.171
Phylopstem3.3832655437499994
Phylopflank3.5460571587499996
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure