Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGGAAGCAGTGGTG
..(((((((..((((((((..&))))))))...)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001242933
GeneSymbolSNX1
Binding site5505,5525
Score1.0
Seed1
Au0.441
Energy-24.4
Binding len20
Me-9.024
Phylopstem-0.14271749999999997
Phylopflank-0.09418361775
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure