Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATAAGCTGCAGCAGGCC
..((.(((((((((...((((&))))....)))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242933
GeneSymbolSNX1
Binding site1357,1379
Score0.846
Seed0
Au0.397
Energy-21.9
Binding len22
Me-10.045
Phylopstem5.707919777777778
Phylopflank5.447603053750001
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure