Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTTACGGAAACTGCATGCTGTT
..(((((((((((((((((((&)).))))))...)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242933
GeneSymbolSNX1
Binding site994,1019
Score0.923
Seed1
Au0.529
Energy-20.7
Binding len25
Me-4.957
Phylopstem3.9010425333333334
Phylopflank4.803695841249999
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure