Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCATCTTGAGCATGCAT
.(((((((..((.((((((((&)))))))).))..))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001242946
GeneSymbolEPDR1
Binding site1772,1794
Score0.846
Seed1
Au0.603
Energy-21.3
Binding len22
Me-7.381
Phylopstem-0.2993253125
Phylopflank0.08302920624999999
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure