Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCCTCAGCAGCTGCAGA
(((((((((((((((((....&)))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243
GeneSymbolTNFRSF8
Binding site2860,2882
Score0.846
Seed1
Au0.353
Energy-26.2
Binding len22
Me-3.938
Phylopstem-0.2457095885714285
Phylopflank-0.43156430450000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure