Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCGGCGCAGCGCGGG
((((.((((((((((((((((&))))))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243014
GeneSymbolABCB9
Binding site13,36
Score0.923
Seed0
Au0.277
Energy-27.4
Binding len23
Me-8.057
Phylopstem0.012512694444444448
Phylopflank-0.4455211545833334
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end8
Position5UTR
2D Structure