Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACCATAACCCAGATGCAAG
(((((.(((.((((((.((((&))))...))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363131
GeneSymbolCSPP1
Binding site2086,2109
Score0.923
Seed0
Au0.632
Energy-19.7
Binding len23
Me-7.081
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure