Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGGCGGAGGTTGCAGT
((((((((.((.((((.((((&)))).)))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243078
GeneSymbolCD28
Binding site1380,1403
Score0.846
Seed1
Au0.412
Energy-21.7
Binding len23
Me-8.341
Phylopstem-0.054415250000000026
Phylopflank0.0058588362499999574
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure