Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCGCTGCTACAAGCTGACAGA
(((((((((((((((.(((((&)))))))))))).......))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243079
GeneSymbolPLK5
Binding site173,202
Score0.846
Seed1
Au0.353
Energy-24.3
Binding len29
Me-4.171
Phylopstem2.16553647826087
Phylopflank0.8601381275000001
Longest consecutive pairings12
Position of longest consecutive pairings17
Pairings in 3prime end7
Position5UTR
2D Structure