Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTGCATTGCAGTAGCAT
.(((.(((((((.((((((((&))).)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243084
GeneSymbolHIF1A
Binding site2920,2941
Score0.846
Seed0
Au0.735
Energy-18.9
Binding len21
Me-9.201
Phylopstem3.140258411111111
Phylopflank2.207537461625
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end8
Position3UTR
2D Structure