Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAAAAGCTTGTTGTGAT
(((((((.((..(((((((((&)))))))))..))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243093
GeneSymbolFYB1
Binding site1648,1671
Score0.846
Seed1
Au0.603
Energy-18.0
Binding len23
Me-12.423
Phylopstem0.3382103777777778
Phylopflank0.03710256500000002
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure