Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAGGACTGTAGCTA
....((((((((((.(.((((&)))).).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243099
GeneSymbolIL5RA
Binding site5456,5474
Score0.923
Seed0
Au0.588
Energy-20.5
Binding len18
Me-10.282
Phylopstem-0.16973792000000001
Phylopflank-0.14449799375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure