Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACAACCAAGAAGAAATACCGTCATTTTCAGGAGCTGCAT
.(((((((.(((((((.(((.&)))..)))))).......................).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243108
GeneSymbolPLD2
Binding site364,408
Score0.846
Seed1
Au0.544
Energy-21.1
Binding len44
Me-4.85
Phylopstem3.352227860666667
Phylopflank2.4354374827500007
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure