Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATTGCGGCCGCAGACGCGC
.(((..((((((((((((.((&)).))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243116
GeneSymbolNFKBIB
Binding site22,43
Score0.846
Seed0
Au0.426
Energy-23.2
Binding len21
Me-9.813
Phylopstem-0.40602716666666666
Phylopflank0.9002557995833331
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end7
Position5UTR
2D Structure