Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCCGCTGGAGCTGTAC
.(((((((.((((.((..(((&)))..)).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243121
GeneSymbolPDE4A
Binding site1803,1824
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len21
Me-5.707
Phylopstem3.209897857142857
Phylopflank5.411821654999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure