Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACATGCCTCTGCCGGGTG
((((((((....((((((((..&)))))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243131
GeneSymbolRPL13
Binding site1695,1717
Score0.846
Seed1
Au0.456
Energy-22.7
Binding len22
Me-12.408
Phylopstem-0.32488975000000003
Phylopflank-0.22688277499999993
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure