Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243156
GeneSymbolTAF1C
Binding site1668,1701
Score0.846
Seed1
Au0.279
Energy-27.5
Binding len16
Me-4.957
Phylopstem-1.7940197142857142
Phylopflank-0.29943863750000005
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure