Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTGCTCCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243157
GeneSymbolTAF1C
Binding site1293,1335
Score0.846
Seed1
Au0.279
Energy-27.5
Binding len16
Me-4.957
Phylopstem-0.11509019285714277
Phylopflank-0.09577320874999998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure