Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTGCTCCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243158
GeneSymbolTAF1C
Binding site1154,1196
Score0.923
Seed1
Au0.279
Energy-27.5
Binding len16
Me-4.957
Phylopstem0.08523620000000001
Phylopflank0.002720858749999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure