Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGTAAGAGTCAGCCAGCCGCGGATGGGGAGCGTGAGTGGCGAGAATCTGCAAA
(((((((((((((((......&.)))))))))........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363133
GeneSymbolCSPP1
Binding site100,157
Score0.923
Seed1
Au0.529
Energy-19.8
Binding len41
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end2
Position5UTR
2D Structure