Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACCTGCAGCTGCC
..((((((((((((...(((.&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243168
GeneSymbolPTCRA
Binding site559,576
Score0.821
Seed1
Au0.309
Energy-22.5
Binding len17
Me-5.925
Phylopstem0.507128
Phylopflank0.32487139125000025
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure