Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGCCAGGA
.((((((......((((((...&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001243169
GeneSymbolPTCRA
Binding site329,342
Score0.846
Seed1
Au0.368
Energy-16.5
Binding len13
Me-15.867
Phylopstem0.8271418833333334
Phylopflank1.1958221075000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure