Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATCAATCCAAGCTGTAT
.(((((((..(((((..((((&))))...)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243203
GeneSymbolRANBP6
Binding site90,112
Score0.923
Seed1
Au0.529
Energy-18.7
Binding len22
Me-6.325
Phylopstem0.7411904285714287
Phylopflank0.971355205
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure