Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTGCAGCAGCAT
.(((.(((((((.........&))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243237
GeneSymbolC8orf89
Binding site26,38
Score0.846
Seed0
Au0.582
Energy-15.9
Binding len12
Me-11.027
Phylopstem-0.33242144285714287
Phylopflank0.644941546875
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end0
Position5UTR
2D Structure