Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTTCCGTAGCTTGCC
..((((((((((.....((((&))))...)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243243
GeneSymbolZSCAN31
Binding site22,41
Score0.923
Seed1
Au0.324
Energy-19.7
Binding len19
Me-8.071
Phylopstem0.5614926
Phylopflank0.14816217638157897
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end4
Position5UTR
2D Structure