Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACTTCCGCGGCCGCC
..((.(((((((..(((....&)))..))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243249
GeneSymbolNPRL3
Binding site1885,1901
Score0.846
Seed0
Au0.426
Energy-20.0
Binding len16
Me-11.222
Phylopstem2.138167
Phylopflank5.213418857500002
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure