Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGCGGAGGAGGAAGCTGTGGCTGCC
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243253
GeneSymbolTIGD6
Binding site99,127
Score0.923
Seed1
Au0.206
Energy-19.2
Binding len14
Me-5.925
Phylopstem0.71824225
Phylopflank0.13490685624999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure