Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGTACAAGGAACATGAAGATGGCTATATGCGGCTGCAGCTGG
...((((((((((((((.(((&.)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243259
GeneSymbolHINFP
Binding site1266,1312
Score0.846
Seed0
Au0.485
Energy-24.7
Binding len22
Me-6.515
Phylopstem-0.5453338571428571
Phylopflank3.5985390612499986
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure