Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCAGCACCTGCAT
.(((((.(((.(((((.((((&))))))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243259
GeneSymbolHINFP
Binding site185,205
Score0.846
Seed0
Au0.426
Energy-21.7
Binding len20
Me-8.162
Phylopstem3.9191074
Phylopflank2.7743826027500003
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure