Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTCAATTGCAGCAGGAAT
((.(.(((((((((((((((.&))))).)))))))))).).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243266
GeneSymbolMS4A4A
Binding site356,378
Score1.0
Seed0
Au0.588
Energy-21.3
Binding len22
Me-9.614
Phylopstem1.0254576874999999
Phylopflank0.31950059250000024
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure