Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACGGCCACACTGTCCTGGAGCCCAGCAGCTGACAAC
((((((((((((((.(.(((.&.)))).))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243271
GeneSymbolCNTN5
Binding site2585,2622
Score0.846
Seed1
Au0.426
Energy-21.3
Binding len24
Me-4.673
Phylopstem4.738724258823529
Phylopflank4.748335836250002
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure