Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCTGCCAGGGGCTGCGT
.(((((((((((((((.....&)))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243299
GeneSymbolAPLP2
Binding site2410,2433
Score0.923
Seed1
Au0.368
Energy-22.4
Binding len23
Me-3.793
Phylopstem1.4449395027272727
Phylopflank1.9064879757500002
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end3
Position3UTR
2D Structure