Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTATATATGGTGGCTGCGGC
((((((((((.((((((((((&)))))))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001243299
GeneSymbolAPLP2
Binding site1084,1107
Score0.808
Seed1
Au0.5
Energy-22.3
Binding len23
Me-6.762
Phylopstem5.74536
Phylopflank6.0049661875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure