Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCAACGGATAGCTGA
...(((((((.((((..((((&))))..)))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363185
GeneSymbolCSMD3
Binding site1267,1287
Score0.923
Seed0
Au0.485
Energy-20.2
Binding len20
Me-9.572
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure